breeding for dark brown eggs is very difficult,just because a chick was hatched from a dark egg is no guarantee that a pullet produced from that egg will go on to lay dark eggs or that her brother will carry the dark egg gene
If you purchased the eggs the breeder might be running a cockerel with them that is unrelated and perhaps not from the same quality of egg,or just doesnt nick with his mate for egg colour
I find to produce a dark brown egg strain you need to use quite a bit of in-breeding/line breeding.Many breeders/sellers of eggs are obsessed with using unrelated stock
it is also true that the males seem to have more input in egg colour than the females
The only way i have found to breed dark brown egg layers is to retain quite a lot of pullets,usually 10-20 that were all hatched from dark eggs ,over the first year i whittle them down to perhaps 1 or 2 birds that have stayed the distance as regards egg colour and laying performance. next year i will breed from them,i usually put them in with a related cock. i will save pullets and cockerels from this mating,if the eggs have improved in the next generation,i use that cockerel again,if it hasnt i mate one of the young cockerels back to mum/aunty