Hi..
.i'm no expert but we hatched duck eggs via an incubator a few years ago and as a first timer it can be quite scary especially when deciding if an egg is developing or not or whether a chick has died in the shell.... if you are unsure let common sense take over and leave the egg in for a further week to candle again for any further growth, obviously the benefit of removing unfertile or dead eggs leaves further room for the good eggs especially if the incubator is already crowding, making the hatching process a little less crowded.
Good luck
Chris